Message4966

Author connolly
Recipients connolly
Date 2009-07-30.21:26:28
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Message-id <1248989188.96.0.326685335191.issue1416@psf.upfronthosting.co.za>
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Content
I'm using jython to drive Jmol and it crashes with SIGSEGV. A trace is
attached.

I'm trying to prune it down to a simpler case, but I can't seem
to reproduce the problem any other way.

To reproduce my environment, here are the files:

Jmol.jar is from jmol 11.6.21, i.e.
http://sourceforge.net/projects/jmol/files/Jmol/Version%2011.6.21/jmol-11.6.21-binary.zip/download
3255e1ed8e152b87ca004ddc2e1f0c11  Jmol.jar

My code (i.e. pdbparts_j.py and a few other modules) is in
http://svn.neurocommons.org/svn/trunk/packages/pdb/ .revision 1178

The input file, 1A1M.xml.gz is
http://www.rcsb.org/pdb/files/1A1M.xml.gz

The script also reads from 1A1M.pdb, i.e.
http://www.rcsb.org/pdb/files/1A1M.pdb

298621766c09c38162ec461756124e0c  1A1M.pdb
cfeb781816003bb99256134f4e5588ea  1A1M.xml.gz
History
Date User Action Args
2009-07-30 21:26:29connollysetrecipients: + connolly
2009-07-30 21:26:28connollysetmessageid: <1248989188.96.0.326685335191.issue1416@psf.upfronthosting.co.za>
2009-07-30 21:26:28connollylinkissue1416 messages
2009-07-30 21:26:28connollycreate